Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKHIVIIGGGLSGLAAAYELQKTHPNYTWELVEKDEKLGGKFETVK-RDGFLIEKGPDSFLARKPAG------VGLVKDLGLEDKLIA-----NATGRSYIYHQKALHPIPEGSVMGI--PTDKEALLASTLVSEIGKARALQEPTMERNNQERDQALGDFFEARFGKELVKTIIEPLLSGIYAGDIYKMSLRATFPQFEQTVKKYGNLMDGLKESSMQTTGTKATI--------GAFRTLEGGLDALPKAIAAALPKENLHTAKQATEI---VKKNNAYEISFADGDKMEADGVIIAATHDALIHLL-AETTTEPFAGQPLT--TLATVSLAYNEQDVPILPDGTGYLVARTAPYKTTACTWVQKKWPHM--VPKNKMLLRGFVGKAGETWLE--QASDEAIVSAVLRDYAE-----IMDLHAAPLFYEVSRMKSAMPQYLVNHQDRLKQLKKNIKTDYPGVFFAGMSYEGVGIPDCIAGAQTAAKELVDYLEEV |
| 4IVM Chain:B ((9-473)) | -RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRSVRGPNGAIFELGPGGI---RPAGALGARTLLLVSELGLDSEVLPVRGDHPAAQNRFLYVGGALHALPTG-LR--PSPPFSKPLFWAGL-------RELTKP----RGKEPDETVHSFAQRRLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLG-----QPDSALIRQALAERWSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSLRD-SSLEADHVISAIPASVLSELLPAEAAPLARALSAITAVSVAVVNLQYQGAHLPV--QGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPG---LRVTV-MLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGASYEGVAVNDCIESGRQAA---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IVM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -179573 for 3481 contacts (-51.6/contact) +
2D Compatibility (PS) -44676 + (NN) -14076 + (LL) 3260
1D Compatibility (HY) -28800 + (ID) 6250
Total energy: -270115.0 ( -77.60 by residue)
QMean score : 0.492
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