Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LMVKRGDVYYADLSPVVGSEQGGIRPVLIIQNDIGNRFSPTVIVAAITAKIQKAKLPTHVEATRKD-GFEKDSVILLEQIRTIDKQRLTDKITHLDEDLMAKVNKALEVSLGVVEF
4MZT Chain:A ((15-125))
--IRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIRTLDKKRLKEKLTYLSDDKMKEVDNALMISLGL---
General information:
TITO was launched using:
RESULT:
Template:
4MZT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63740 for 783 contacts (-81.4/contact) +
2D Compatibility (PS) -11982 + (NN) -5679 + (LL) 812
1D Compatibility (HY) -12800 + (ID) 3700
Total energy: -97089.0 ( -124.00 by residue)
QMean score : 0.566
(partial model without unconserved sides chains):
PDB file :
Tito_4MZT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MZT-query.scw
PDB file :
Tito_Scwrl_4MZT.pdb
: