Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VGIPILKLGECLLISIQSELDDHTAVEFQEDLLAKIHETSARGVVIDITSIDFID-SFIAKILGDVVSMSKLMGAKVVVTGIQPAVAITLIELGITFSGVLSAMDLESGLEKLKQELGE
1TID Chain:B ((15-90))
---------DVLIVRLSGELDHHTAEELREQVTDVLENRAIRHIVLNLGQLTFMDASGLGVILGRYKQI-KNVGGQMVVCAVSPAV---------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1TID.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59625 for 505 contacts (-118.1/contact) +
2D Compatibility (PS) -8248 + (NN) -5543 + (LL) 3192
1D Compatibility (HY) -8800 + (ID) 1200
Total energy: -80224.0 ( -158.86 by residue)
QMean score : 0.513
(partial model without unconserved sides chains):
PDB file :
Tito_1TID.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1TID-query.scw
PDB file :
Tito_Scwrl_1TID.pdb
: