Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDNKLEFTTIDEYITQAPPETKEV--LQKIRETIKAAAPEATEKISYQMPTFYLEGNLVHFAVAKNHYGFYPASSGIAAFE--SKLGNYKHSKGAVQFPIKEEVPYELIKEMTLFRLAENKQKAAEKLAKKKKK
1IW1 Chain:A ((100-173))
-------------ITASPAVIDYVNRLEEIRDNVDGPALVAHHYVRYLGD---LSGGQVIARMMQRHYGVDPEALGFYHFEGIAKLKVYK--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1IW1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1821 for 331 contacts (5.5/contact) +
2D Compatibility (PS) -7443 + (NN) -604 + (LL) 5216
1D Compatibility (HY) -4800 + (ID) 1200
Total energy: -7010.0 ( -21.18 by residue)
QMean score : 0.210
(partial model without unconserved sides chains):
PDB file :
Tito_1IW1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IW1-query.scw
PDB file :
Tito_Scwrl_1IW1.pdb
: