Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNILLICGSGASSGFMAAAIRKAAKKRGEQVTVKAASESQIDERINEIDYLLIGPHLAYMLDDLKQKVADKDVLVSIIPQATYGTLNGEKALDLILNMEG
1H9C Chain:A ((4-89))
-KHIYLF-SAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQIAYMLPEIQRLLPNKP--VEVIDSLLYGKVDG------------
General information:
TITO was launched using:
RESULT:
Template:
1H9C.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44131 for 579 contacts (-76.2/contact) +
2D Compatibility (PS) -9375 + (NN) -5404 + (LL) 1660
1D Compatibility (HY) -8400 + (ID) 1300
Total energy: -66950.0 ( -115.63 by residue)
QMean score : 0.568
(partial model without unconserved sides chains):
PDB file :
Tito_1H9C.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1H9C-query.scw
PDB file :
Tito_Scwrl_1H9C.pdb
: