Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYFIDNNNEKDPRINLAVEEFILTELNL-DEPVLLFYINKPSIIIGRNQNTVEEIDTEYVEKNDVIVVRRLSGGGAVYHDEGNLNFSFI-TEDDGESFHNFAKFTQPIVEALKRLGVNAE----------LKGRNDLLIDGFKVSGNAQFATKGKMFSHGTLMYDLNLDNVAASLKPRKDKIESKGIKSVRSRVANISDFMDQEMTTEEFRDLLLLYIFGVEKVEDVKEYKLTAADWEKIHEISAKRYGNWDWNYGKSPKFDLTRTKRFPVGAVDVRLNVQKGVITDIKIFGDFFGVKNVADIEEKLVNTTYKREVLAEALVDIDVKEYFGNITKDEFLDLLY |
3R07 Chain:A ((38-278)) | ------------RMSLAYDEAIYRSFQYGDKPILRFYRHDRSVIIGYFQVAEEEVDLDYMKKNGIMLARRYTGGGAVYHDLGDLNFSVVRSSDDMDITSMFRTMNEAVVNSLRILGLDARPGELNDVSIPV--------GEKKIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLKVPDEKFRDKIAKSTRERVANVTDFVD--VSIDEVRNALIRGFSETLHI-DFREDTITEKEESLARELFDKKYSTEEWNMG--------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3R07.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -95894 for 1709 contacts (-56.1/contact) +
2D Compatibility (PS) -23615 + (NN) -7324 + (LL) 7436
1D Compatibility (HY) -15600 + (ID) 3950
Total energy: -138947.0 ( -81.30 by residue)
QMean score : 0.496
|
|
|