Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTTSIIERIDAWAEKTPDFPCYEYAGTRLSYKELKRQSDAFGSFLLKNLITDKEKPIIVYGHMSPLMLVAFLGSIKSGRAYVPVDVSMPVERIEQIKKAADPSMFICTEELPNNLTITGCPVLTQDQLMDALEKHFGEVP-DKEACVNNDDNYYIIYTSGSTGNPKGVQISQNNLVSFSNWILQD--FSLSQGLRFLNQAPFSFDLSVMDLYPSLLSGGTLVPLDKTITANMKDLYREIPAQNLDVWVSTPSFADLCLLDENFNQENNPRLTRFLFCGEVLAKKTASELLDRFPDAVIYNTYGPTEATVAVTQVKVTREIIDAYPSLPLGVIKPDMRLHIVDQETGEVLPEGEKGEIVLIGASVSKGYLNEPEKTDQVFFDYKGYQAYRTGDSG-IIKDGYLFFQGRLDFQIKLHGYRIELEDIENNLKKVSYIQNCAIIPKM-KDEKVDMLVAQVI---PTTHDFEKEYQLSAAIKKELKEFMPAYMIPRKWIYKTDFPLTMNGKIDRKSLNSEVNK |
3L8C Chain:A ((1-506)) | ----MIDSIEQFAQTQADFPVYDCLGERRTYGQLKRDSDSIAAFI-DSLALLAKSPVLVFGAQTYDMLATFVALTKSGHAYIPVDVHSAPERILAIIEIAKPSLIIAIEEFP--LTIEGISLVSLSEIESA---KLAEMPYERTHSVKGDDNYYIIFTS---GQPKGVQISHDNLLSFTNWMIEDAAFDVPKQPQMLAQPPYSFDLSVMYWAPTLALGGTLFALPKELVADFKQLFTTIAQLPVGIWTSTPSFADMAMLSDDFCQAKMPALTHFYFDGEELTVSTARKLFERFPSAKIINAYGPTEATVALSAIEITREMVDNYTRLPIGYPKPDSPTYIID-EDGKELSSGEQGEIIVTGPAVSKGYLNNPEKTAEAFFTFKGQPAYHTGDIGSLTEDNILLYGGRLDFQIK-----IELEDVSQQLNQSPMVASAVAVPRYNKEHK---LLAYIVVKDGVKERFDRELELTKAIKASVKDHMMSYMMPSKFLYRDSLPLTPNGKIDIKTLINEVN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L8C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -280195 for 4184 contacts (-67.0/contact) +
2D Compatibility (PS) -52716 + (NN) -20872 + (LL) 1244
1D Compatibility (HY) -48000 + (ID) 11250
Total energy: -411789.0 ( -98.42 by residue)
QMean score : 0.539
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