Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEQASFVVIDETGIHARPATLLVQAASKYSSDVQIEYTGKKVNLKSIMGVMSLGIGKGADITIYTEGSDEKEAIEGLTEVLKKEGLAE
1SPH Chain:A ((2-88))
-AQKTFKVTADSGIHARPATVLVQTASKYDADVNLEYNGKTVNLKDIMGVMSLGIAKGAEITISASGADENDALNALEETMKSEGLGE
General information:
TITO was launched using:
RESULT:
Template:
1SPH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57636 for 657 contacts (-87.7/contact) +
2D Compatibility (PS) -9581 + (NN) -4769 + (LL) 208
1D Compatibility (HY) -8000 + (ID) 2700
Total energy: -82478.0 ( -125.54 by residue)
QMean score : 0.682
(partial model without unconserved sides chains):
PDB file :
Tito_1SPH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SPH-query.scw
PDB file :
Tito_Scwrl_1SPH.pdb
: