Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSKKKKIVVIGRSNLQNLYIHTVLLKKLPAEIYLID---DQAKTSVQDFDYASYYHADVTIHSGTFNECRNADIVVFFQEEMSNQIVSKED----NVALIIEKVKKMMATGFRGIVLVATAESNVVAALIKRFSGLSANQIITLGTMLATSYFQVEIAKLFKISPKNVHGYIIGDNAEDVIPVWSRAFLGGKPILSYLAEDQKRISAEDLQNLTKMITKIPDFPFENKDGCTFRFSTVTVLAELTEVILRDEARVITVGVEVKEAYGLENPVFISVPAVIGAEGVRELLELNLSDDEQKELKQIAAKTTEKLEELQLNKGGIS |
| 1EZ4 Chain:A ((2-302)) | MPNHQK-VVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGA----------LVNKNLNILSSIVKPVVDSGFDGIFLVAANPVDILTYATWKFSGFPKERVIGSGTSLDSSRLRVALGKQFNVDPRSVDAYIMGEHGDSEFAAYSTATIGTRPVRDVAKE--QGVSDDDLAKLEDGV-RNKAYDIINLKGATF-YGIGTALMRISKAILRDENAVLPVGAYMDGQYGL-NDIYIGTPAIIGGTGLKQIIESPLSADELKKMQDSAA----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EZ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -271596 for 2500 contacts (-108.6/contact) +
2D Compatibility (PS) -30507 + (NN) -13459 + (LL) 2052
1D Compatibility (HY) -20400 + (ID) 4400
Total energy: -338310.0 ( -135.32 by residue)
QMean score : 0.629
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