Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDSEKIDYLARLWIMEAAAKIKQSFKETLDIDVKSGRNDLVTNMDKETEAFFVQQIKDHFPDHCLFGEEGMASDVTDLDGVVWILDPIDGTLNFVEQQRDFAISLAVYEDGIGRLAYIYDVTRDELYFGEKGKGATVNGRTIPKLDPAIDLKDTLLIANLSVTRKFPTMWEAVKVSRGLRLHGAASLEYMDVATGRAGAYLSANLAPWDIAAGKIIVEELGGKVTRINGEKINMLEKGSSIVASPKIHQTLLDNYLP
4I3E Chain:A ((13-258))
---QQIDKLICSWLKQIDNVIPQLIME-MTTETKRHRFDLVTNVDKQIQQQFQQFLATYFPEHQLLAEEKSNAM---EINHLWIMDPIDGTANLVKQQEDYCIILAYFYEGKPMLSYVYDYPHKKLYKAIRGEGAFCNGIKMEE-PPSLKLEDAIISFNAQVMN-LDTVQDLFDASFSYRLVGACGLDSMRVAKGQFGAHINTNPKPWDIAAQFLFAELLNLKMTTLDGKAIDHLKGAPFIISNKACHETVL-----
General information:
TITO was launched using:
RESULT:
Template:
4I3E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -131519 for 1991 contacts (-66.1/contact) +
2D Compatibility (PS) -26753 + (NN) -13662 + (LL) 536
1D Compatibility (HY) -16400 + (ID) 4400
Total energy: -192198.0 ( -96.53 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_4I3E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4I3E-query.scw
PDB file :
Tito_Scwrl_4I3E.pdb
: