Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLVKYFAIFGVVFSMFFSLLLFVTIVFAEEDDTRSSREEMIQQGGLNVSAEVLAHRPMVEKYCKEFGIEEYVNYILAIMQVESGGTAEDVMQSSESLGLPPNSLSTEESIKQGCKYFSELLASAESNGCDINTVIQSYNYGGGFINYVASNGKKYSYELAESFSKDKAGGVKVDYPNPIAIPVNGGWRYNYGNQFYVLLVSQYLTPVQFDDETVQAIMNEALKYEGYPYVFGGSSPSTSFDCSGLTQWSYAVAGIQLPRVAQAQYDATQHIPLSEAKAGDLVFFHSTYDAGSYVTHVGIYVGNNQMYHAG------DPIGYTNLTD-------SYWQAHLIGAGRIIK |
| 2FG0 Chain:A ((112-239)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VIAFTQKAMQQSNY-YLWGGTV-GPNYDCSGLMQAAFASVGIWLPRDAYQQEGFTQPITIAELVAGDLVFFGTSQKA----THVGLYLADGYYIHSSGKDQGRDGIGIDILSEQGDAVSLSYYQ-QLRGAGRVFK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FG0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -72941 for 882 contacts (-82.7/contact) +
2D Compatibility (PS) -12193 + (NN) -4296 + (LL) 13592
1D Compatibility (HY) -10000 + (ID) 2600
Total energy: -88438.0 ( -100.27 by residue)
QMean score : 0.445
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