Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSEWTIIGWLLKFVKPLRGKMILAILLGIISN-LSVIMISLIG-TYGIIAVILQQPLNPYKWLFVMVACGVVRGLARYLEQ----YLNHDIAFRLLAIIRERIFATLRKLGPARLSGKKSGDLVAAITTDVEALEVFFAHTISPVFIALGTTIATVGFLASYDVGLAIILLVGQIMVGVVLPMISYKRNKKIGTAYQQAFVGLNQMVMENIASLQDIFQFKLGEERLRKLETQGEKLNRQYKKRIRQGSELQILGEWV-----LIGTATIILVLGSLSQLPLETVL-IGTVLSLSSFGSVLA--LNALGTA---LLTTFASGKRLYA---LTEEKPVVLFNGQLELSDFESA-ELDKVSFSHDGKQPLLNELSLALPKGKWLGIGGESGSGKSTLVKLLMRYWDPD-GQVKLNNNELPKITESSLHRLEGVMEQRTFLFEDTLGNNIRLGKKDATLEEVKEAARKAAIDTWIETLPEGYETIIGGQSRNLSDGERQRIGLARLFLHDAPLLLLDEPTSNLDYINEQAILNTLRSEIQDKTVLVISHRATTLDLAEEQLFIENGALKRAAK
4Q4J Chain:B ((28-572))---------LLGYLRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRRFDLLP-RYMLILGTIYALTSLLFWLQGKIMLTLSQDVVFRL----RKELFEKLQRVPVGFFDRTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVILSLVTL-SIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKV-------GTKAQIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEEEKDD---PDAVELREVRGEIEFKNVWFSYDKKKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQGQRQLLAITRAFLANPKILILDEATCNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGK


General information:
TITO was launched using:
RESULT:

Template: 4Q4J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -217428 for 3725 contacts (-58.4/contact) +
2D Compatibility (PS) -54128 + (NN) -13496 + (LL) 3140
1D Compatibility (HY) -50000 + (ID) 7550
Total energy: -339462.0 ( -91.13 by residue)
QMean score : 0.338

(partial model without unconserved sides chains):
PDB file : Tito_4Q4J.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4Q4J-query.scw
PDB file : Tito_Scwrl_4Q4J.pdb: