Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHQAIGIIEIKGLASAIAVADTMAKVANIQLVDTEKAKGFGWITVKVEGDVAAVNAALEAGEQTAIASDSFIAKKVIPRPGEEIFTVFWPKEEIEPEKPEVMVETEKVEETEAPTEATCNLCHDPLCPRVKGDPRQDCIHFEEEK
3NGK Chain:A ((4-80))
--EALGMVETKGLTAAIEAADAMVKSANVMLVGYEKI-GSGLVTVIVRGDVGAVKAATDAGAAAARNVGEVKAVHVIPRP-----------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3NGK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40659 for 625 contacts (-65.1/contact) +
2D Compatibility (PS) -8766 + (NN) -5029 + (LL) 4532
1D Compatibility (HY) -4400 + (ID) 1950
Total energy: -56272.0 ( -90.04 by residue)
QMean score : 0.603
(partial model without unconserved sides chains):
PDB file :
Tito_3NGK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3NGK-query.scw
PDB file :
Tito_Scwrl_3NGK.pdb
: