Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKITTASHGGNYNELAKQHGLTKEMVLDFSANINPLGVPASLKQTITANLDKLV--EYPEPDYLALRARIASFHQLDLA-NVIPGNGATELI--FGIAKVTKAQKVLLLAPTFAEYERA--FFDAEIVYAELTKETNFAAVEIVLEILERDTEIEAVCLCNPNNPTGQLI--AQQEMIKIADLCEKRNIYLIIDEAFMDFLEENETISMINNLERFPHVAIIRAFTKFFAIPGLRLGYLLTKNDLLAEALMQMREPWSINTFADLAGQMLLEDEAYIRQTFDWINEERDFLYRGLSRFSALTVYRPTVNYIFFHLEKPLDLRKELLLKGIFIRSCANYRGLTENYYRVAVKSRADNSQLLTALEVIFSGN |
| 3EUC Chain:A ((22-360)) | ---------GAYH-VPDSHGLVK-----LDAMENPYRLPPALRSELAARLGEVALNRYPVPSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRADFTLDRGAMLAAMAEHQPAI--VYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQE----SWMSRLTDFGNLLVMRTVSKL-GLAGIRLGYVAGDPQWL-EQLDKVRPPYNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHGGVTVFPSAANFLLARVPDAAQTFDRLLARKVLIKNVSKMHPLLANCLRVTVSTPEENAQFLEA-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3EUC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -215544 for 2675 contacts (-80.6/contact) +
2D Compatibility (PS) -36455 + (NN) -21384 + (LL) 2592
1D Compatibility (HY) -24000 + (ID) 4700
Total energy: -299491.0 ( -111.96 by residue)
QMean score : 0.423
|
|
|