Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKEITDATFEQETSEGLVLTDFWATWCGPCRMVAPVLEEIQEERGEALKIVKMDVDENPETPGSFGVMSIPTLLIKKDGEVVETIIGYRPKEELDEVINKYV
2O87 Chain:A ((5-104))
---KVTDADFDSKVESGVQLVDFWATWCGSCKMIAPVLEELAADYEGKADILKLDVDENPSTAAKYEVMSIPTLIVFKDGQPVDKVVGFQPKENLAEVLDKHL
General information:
TITO was launched using:
RESULT:
Template:
2O87.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56263 for 712 contacts (-79.0/contact) +
2D Compatibility (PS) -10391 + (NN) 701 + (LL) 464
1D Compatibility (HY) -11600 + (ID) 2500
Total energy: -79589.0 ( -111.78 by residue)
QMean score : 0.559
(partial model without unconserved sides chains):
PDB file :
Tito_2O87.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O87-query.scw
PDB file :
Tito_Scwrl_2O87.pdb
: