Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTIQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNPMLEEIIHQKRRVIILNKAD----TADEKTTKEWIDYFAEK-GLP---AVAVNAQEGKGLFKIEQAAEKLMAEKFDRLRSKGMKPRAIRAMILGIPNVGKSTLINRLAK------KNIARTGNKPGVTKAQQWIKVGKTLELLDTPGILWPKFEDQEIGYK----LALTGAIKDDLLQMEE--------------IAGYGLRFLENHYPDRLQTWLKVETVSEDPIETLAFIAEKRGLLDRYNDPDYSRAAETVVREIRQQKLGRMSFDFPNWEDEVE |
| 3H2Y Chain:A ((88-284)) | -----------------------------------------PGLHRFVGNNKVLLVGNKADLIPKSVKHDKVKHWMRYSAKQLGLKPEDVFLISAAKGQGIAELADAIEYYRGGK--------------DVYVVGCTNVGKSTFINRMIKEFSDETENVITTSHFP----DLIDIPLDEESSLYDTPGIINHHQMAHYVGKQSLKLITPTKEIKPMVFQLNEEQTLFFSGLARFDYVSG-GRRAFTCHFSNRL------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -32479 for 916 contacts (-35.5/contact) +
2D Compatibility (PS) -17024 + (NN) -2315 + (LL) 9720
1D Compatibility (HY) -10800 + (ID) 2550
Total energy: -55448.0 ( -60.53 by residue)
QMean score : 0.375
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