Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VQQINWKKNVSFRSGSPAFTLLETILSITIILSISLLIPLFFQCYNKTIQLSNIDQTTEWQLFLIQTRLELEKATNIQIDGNKLSFSNGKDLITYSKYNDLVRRQVNGKGHEPLLTNVKDYQLIKKEKQLHLTVQDSNTQIYTSVFALPEVVSNP |
| 3VXJ Chain:A ((370-408)) | -QQINWANNANFPFSKPITPGIEPIIGQTTPRTVGGLDPL------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VXJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1827 for 194 contacts (-9.4/contact) +
2D Compatibility (PS) -3644 + (NN) 2675 + (LL) 8184
1D Compatibility (HY) 0 + (ID) 700
Total energy: 4688.0 ( 24.16 by residue)
QMean score : -0.033
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