Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VATKKKTFEEAIAELETIVEALENGSASLEDSLDMYQKGIELTKLCQDKLQSAEKRMAKVVTDAGEEIPFEADGE
3HE4 Chain:A ((18-45))
------------AKLENIVARLENDNANLEKDIANLEKDI-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3HE4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1118 for 102 contacts (11.0/contact) +
2D Compatibility (PS) -3086 + (NN) -1994 + (LL) 3992
1D Compatibility (HY) -2800 + (ID) 650
Total energy: -3420.0 ( -33.53 by residue)
QMean score : 0.478
(partial model without unconserved sides chains):
PDB file :
Tito_3HE4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HE4-query.scw
PDB file :
Tito_Scwrl_3HE4.pdb
: