Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTSPFSLKSRSLKFKWTFGASAAIFLTFFLFSYAIYQGIGQMLLNEEEPEVKELLLATTSTLTNQDLTDNEEIKYLFNNDKTVNRKLQDQVINLYDKDGHFINKYYFSRSQDITSIDFSQYFVSGTDKFIMNKPTIDGQKMMTAQMPIVADDNTTVIGYAQVVNPLTSYNRMMDRLLVTMILLGAVALFISGMLGYLLAQNFLNPLTRLARTMNDIRKNGFQKRIETKTNSRDEIGELTVVFNDMMTRIETSFEQQKQFVEDASHELRTPVQIMEGHLKLLTRWGKDDPAVLDESLNASLTELERMKKLVQEMLDLSRAEQ----ISQTKEL-----QITDVNA-TVEQVRRNFEVMYENFTFTLKEDDTDLRALIQHNHLEQILIIIMDNAVKYSGDGTEVDMHVYKEQKQIHIDVRDYGEGISQEEIDKIFNRFYRVDKARSREKGGNGLGLAIAKQLVEGYLGTINAVSEPDKGTTIKITLPYIEPKSK |
| 4BIY Chain:A ((61-293)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA-GASFNQVVTALERMMTSQQRLLSDISHELRTPLTRLQLGTALLRRRSGES-----KELERIETEAQRLDSMINDLLVMSRNQQKNALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNP---------NALESALENIVRNALRYSHTKIEVGFAVDKDG--ITITVDDDGPGVSPEDREQIFRPFYRTD---------TGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLP------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BIY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42232 for 1446 contacts (-29.2/contact) +
2D Compatibility (PS) -23118 + (NN) -11497 + (LL) 19200
1D Compatibility (HY) -11600 + (ID) 3600
Total energy: -72847.0 ( -50.38 by residue)
QMean score : 0.398
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