Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQNKRLIILLECAIFAAVAMVLSFIPLDIGSSFSISLGMIPMYVIAIRRGFWAAGFAGLLWGLLHFLTGKAYILMPSQAIIEYILAFSFIAFSGVFSKQVRSNLAANQLKKAIEWAWGTMIIGGLARYFWHYVAGVLFWGAYAFQGWGAQLFSIVMNGASCLGTVLVSGIIISILLKTSPKLFLPK
4POP Chain:A ((17-188))--NVRL--LTEIAFMAALAFIISLIPNTVYGWIIVEIACIPILLLSLRRGLTAGLVGGLIWGILSMITGHAYILSLSQAFLEYLVAPVSLGIAGLF----RQKTAPLKLAPVL---LGTF-VAVLLKYFFHFIAGIIFWSQYAWKGWGAVAYSLAVNGISGILTAIAAFVILIIFVKKFPKLFI--


General information:
TITO was launched using:
RESULT:

Template: 4POP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -176460 for 1390 contacts (-126.9/contact) +
2D Compatibility (PS) -17673 + (NN) -2962 + (LL) 1616
1D Compatibility (HY) -25200 + (ID) 3400
Total energy: -224079.0 ( -161.21 by residue)
QMean score : 0.392

(partial model without unconserved sides chains):
PDB file : Tito_4POP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4POP-query.scw
PDB file : Tito_Scwrl_4POP.pdb: