Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLTVNNVGLRYGDKKLFEDVSIKFLPGNCYGLIGANGAGKSTFLKVLSGEL--------DSQSGNVHIGSGERLAVLRQDHF--------------QYDDELVLNTVIMGHERLYKIMDEKNAIYMKEDFSDEDGIRAAELEGEFAELDGWEAESDAAVLLNGLGIPTDLHGKLMKDLTGGEKVKVLLAQALFGKPDILLLDEPTNHLDIR-------AIHWLEEFLINFDNTVIVVSHDRHFLNKVCTHIADLDFSKIKLYVGNYDFWYESSQLAQTMMGDRNKKKEEKMKELQDFIARFSANASKSKQATSRKKMLEKITLEDIQPSSRRYPFIQFKPDREVGNDLLTVTNLSKTIDGVKILDNLSFSINRNDKVALVGDDEVAKTVLFQILAGEMEPDEGSYKWGITTSQSYFPKDNSEFFEENDMSLVEWLRQFSPEDDSEAFLRGFLGRMLFSGDEVLKKVRVLSGGEKVRCMLSKMMLSGSNVLLLDEPTNHLDLESITALNNGL----EAFKGAIIFASHDHQLLQTIATRIINLSKDQFYNKEISYDEYLKEVMNVAE |
| 1YQT Chain:A ((47-472)) | --------------------------GMVVGIVGPNGTGKSTAVKILAGQLIPNLCGDNDSWDGVIRAFRGNEL----QNYFEKLKNGEIRPVVKPQYVD-LIPKAVKGKVIELLKKADETGKL--------EEVVKALELE--------------------------NVLEREIQHLSGGELQRVAIAAALLRNATFYFFDEPSSYLDIRQRLNAARAIRRLSEE----GKSVLVVEHDLAVLD----YLSDI----IHVVYGEPGVYGIFSQ----PKGTRNGINEFLRGYLKDENVRFRPYEIKFTKTGERVEI-----------------------ERET---LVTYPRLVKDYGSFR-LEVEPGEIKKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKIEWDLTVA--YKPQYIKADYE---GTVYELLSKIDASKLNSNFYKTELLKPLGIIDLYDREVNELSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRL--------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YQT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -120985 for 3055 contacts (-39.6/contact) +
2D Compatibility (PS) -41689 + (NN) -15892 + (LL) 9228
1D Compatibility (HY) -26000 + (ID) 6250
Total energy: -201588.0 ( -65.99 by residue)
QMean score : 0.336
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