Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLTATQKRFLRKEAHNIQPIFQVGKGSVSPNLIIHVKEALEARELIKISILQNCEEDKQTVAEKISARSGAEIVQVIGRTIILYKTSVNKQQIKLP
1JO0 Chain:A ((2-96))
TLSTKQKQFLKGLAHHLNPVVMLGGNGLTEGVLAEIENALNHHELIKVKVAGADRETKQLIINAIVRETKAAQVQTIGHILVLYRPSE-EAKIQLP
General information:
TITO was launched using:
RESULT:
Template:
1JO0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47425 for 644 contacts (-73.6/contact) +
2D Compatibility (PS) -10120 + (NN) -2855 + (LL) -80
1D Compatibility (HY) -7600 + (ID) 1500
Total energy: -69580.0 ( -108.04 by residue)
QMean score : 0.716
(partial model without unconserved sides chains):
PDB file :
Tito_1JO0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JO0-query.scw
PDB file :
Tito_Scwrl_1JO0.pdb
: