Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LEKYVVIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDAFETEIKKLMDS----GVRGFNITTPFKERILPFLDELDNLAAASGAVNTVLKKEDKWYGFNTDGKGYLEGLEEIRSITEDDSILITGAGGASKAIYLALSTHTDAKITVANRTTEKAIEMTKD------NNNHHAITLEEAEKQLADFTIIIQTTSIGLEASKNKSPISLA-NVKQGTICSDIIYNPAETAFLKEAKKNGAITQNGLPMFVNQGALAFEIWTGIKPERSLMKEAVLEQLGGN |
| 1NVT Chain:A ((16-285)) | -----LIGHPVEHSFSPIMHNAAFKDKGLNYVY----VAFDVLPENLKYVIDGAKALGIVGFNVTIPHKIEIMKYLDEIDKDAQLIGAVNTIKIEDGKAIGYNTDGIGARMALEEEIGRVKDKNIVIYGAGGAARAVAFELAK--DNNIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPIGMYPNIDVEPIVKAEKLREDMVVMDLIYNPLETVLLKEAKKVNAKTINGLGMLIYQGAVAFKIWTGVEPNIEVMKNAIIDKI--- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1NVT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -95577 for 2167 contacts (-44.1/contact) +
2D Compatibility (PS) -27621 + (NN) -8921 + (LL) 560
1D Compatibility (HY) -21200 + (ID) 5300
Total energy: -158059.0 ( -72.94 by residue)
QMean score : 0.513
|
|
|