Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNTKGKKITIIISIIILILVIATFSGYYYVKSQLEPKDEASKEKITVEIPAGSSISDISTILEDKKVINNASIFSFYVKYNNDTNLKAGNYELSPAMNTDQIVKKMQEGKTVAPAKLVIPEGYTLDQIADRIVAYQPKLK---KADVLKTMDDPEFVASMIKAYPETVTNDVLNKSIKHPLEGYLYPATYTFKGTDVSAEQIITEMVKATDVNIAKYR-DELTKQK-MSVHKFLTMSSIIEKEATENVDRKMIASVFYNRLAKDMRLQTDPTVLYALGEH-KSKTTYKDLEVDSPYNTYKNNGLPPGPISNSGDSSMEAALYPEKSDYLYFLANTKTGKVYFSKTLEEHNKLKEEHITKNN |
| 2R1F Chain:A ((11-264)) | -------------------------------------------------------------------------------------HFKAGTYRFTPQMTVREMLKLLESGKE-AQFPLRLVEGMRLSDYLKQLRE-APYIKHTLSDDKYATVAQA-L--------E-----L---E-NPEWIEGWFWPDTWMYTA-NTTDVALLKRAHKKMVKAVDSAWEGRADGLPYKDKNQLVTMASIIEKETAVASERDQVASVFINRLRIGMRLQTDPTVIYGMGERYNGKLSRADLETPTAYNTYTITGLPPGAIATPGADSLKAAAHPAKTPYLYFVAD-GKGGHTFNTNLASHNKSVQDYLKVL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2R1F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -16476 for 1827 contacts (-9.0/contact) +
2D Compatibility (PS) -26846 + (NN) -11860 + (LL) 8456
1D Compatibility (HY) -14000 + (ID) 4100
Total energy: -64826.0 ( -35.48 by residue)
QMean score : 0.508
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