Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKITTKGRYGLTITLELAKRIGDGPISLRSIAQDKNLSEHYLEQLIGPLRNAGIVKSIRGAHGGYVLNGDPEKITAGDIIRTLEGPI--VLVESMEDEEAAQRELWTRMRNAVRDVLDQTTLADLLKHSTDSELTDGYMFYI
4HF1 Chain:A ((1-132))
MRLTSKGRYAVTAMLDVALNSEAGPVPLADISERQGISLSYLEQLFSRLRKNGLVSSVRGPGGGYLLGKDASSIAVGEVISAVDESVDA-----------LTHALWRDLSDRLTGFLNNITLGELVNN--------------
General information:
TITO was launched using:
RESULT:
Template:
4HF1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -67885 for 796 contacts (-85.3/contact) +
2D Compatibility (PS) -12333 + (NN) -4362 + (LL) 1956
1D Compatibility (HY) -13200 + (ID) 2000
Total energy: -97824.0 ( -122.89 by residue)
QMean score : 0.639
(partial model without unconserved sides chains):
PDB file :
Tito_4HF1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HF1-query.scw
PDB file :
Tito_Scwrl_4HF1.pdb
: