Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFVDQVKIYVKAGNGGDGMVAFRREKFVPNGGPAGGDGGKGADVVFVVDEGLRTLVDFRFKRIFKAEHGEHGMSKSMHGRGAEDLVVKVPQGTIVKDIDTGEIIADLVAHGQRAVIAKAGRGGRGNKRFATPANPAPELSENGEPGQERNVQLELKVLADVGLVGFPSVGKSTLLSVVSAARPKIAAYHFTTIVPNLGMVDAGDGRSFVMADLPGLI--------EGASQGVGLGHQFLRHIERTRVIVHVIDMSGSEGRVPYEDYMAINNELEQYNLRLMERPQIIVANKMDMPDAEENLNEFKTKIAED-IPVFPISAVTKTGLRELLLAIADKLETTPEFPLNEILEQEDEDTVLYKYVAEEPDFEISREPDGTFVLSGAKIERLFTMTNFERDASISRFARQLRAMGVDEALRKRGAKDGDIVRLLDYEFEFMD |
2E87 Chain:A ((170-323)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------VVIAGHPNVGKSTLLKALTTAKPEIASYPFTTRGINVGQFEDGYFR-YQIIDTPGLLDRPISERNEIEKQAI-LALRYLGNL-----IIYIFDPSEHCG-FPLEEQIHL---FEEVHGEFKDLPFLVVINKIDVAD-EENIKRLEKFVKEKGLNPIKISALKGTGI---------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2E87.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -78122 for 1096 contacts (-71.3/contact) +
2D Compatibility (PS) -15668 + (NN) -5215 + (LL) 17016
1D Compatibility (HY) -12400 + (ID) 2600
Total energy: -96989.0 ( -88.49 by residue)
QMean score : 0.509
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