Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKNIDVLQNWLKDQGAEVGFLTDPENIAYFSGYH-SEPHERVLGLAVFSDSEPFLFTPALEVEDVRGGDWTHPAYGYNDTENPFTIIADEIKKRVANPSKFAIEKKHMSVDRYEQLGGLFSGSSFI--PIEHKIEQIRLIKTEAELKILKEAALLADYAVQVGVDEIAEGKTEAEIVAKIEYEMKKKGVTAMSFDTMVLTGKNGALPHGTPGETKIKKGDLVLFDLGVVHKGYCSDITRTVAFGDISDEQKKIYDTVLEAQIAAVEKVKAGVKASEIDLTARNIIREAGFGDYFPHRLGHGLGASVHEFPSITETNSMELQENMVFTIEPGIYVPGVAGVRIEDDLVVTKDGVQVLTEFPKTLQVIE |
1WN1 Chain:A ((10-356)) | -----------LGERGFDGALISPGTNLYYLTGLRLHEVGERLAILAVSAEGDYRFLAPSL-YENVVN---NFPATFWHDGENPYAKLREILEELGISKGRILIE----DTMRADWLIGIMKLGKFTFQPLSSLIKELRMIKDKEEVKMMEHASRIADKVFEEILTWDLIGMKERELALKIELLIRELS-DGIAFEPIVASGENAANPHHEPGERKIRKGDIIILDYGARWKGYCSDITRTIGLGELDERLVKIYEVVKDAQESAFKAVREGIKAKDVDSRAREVISKAGYGEYFIHRTGHGLGLDVHEEPYIGPDGEVILKNGMTFTIEPGIYVPGLGGVRIEDDIVVDEGKGRRLTKAERELIIL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1WN1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137589 for 2927 contacts (-47.0/contact) +
2D Compatibility (PS) -38119 + (NN) -20558 + (LL) 1676
1D Compatibility (HY) -24400 + (ID) 6400
Total energy: -225390.0 ( -77.00 by residue)
QMean score : 0.483
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