Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKTLTNKLAEKEHAAVVTYIMGGDGGLDNLEEQLLFLEKSGVSAIEIGIPFSDPVADGPIIQLAGLRALKEQVSLEAILN--KLAMSKVQIPLIIMSYINPIFHLGIPKFVELVQKTPVKGLIIPDLPYEHQKLITPELQGTDIALIPLVSLTSPKERLEEIAKQAEGFIYAVTVNGTTGVRSEFDAHIDSHLAYLKSISPVPVLAGFGVSSIEH-VEKFAHVCDGVIIGSKVVQMLHEEKTAELGAFLQKAAEVRIKN
2DZS Chain:A ((3-243))
------------KDGSLIPYLTAGDPDKQSTLNFLLALDEYA-GAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPIVLMTYYNPIYRAGVRNFLAAAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGFVYLVSLYGT----EEIPKTAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLKEGANGVVVGSALVKIIG-EKGREATEFLKKKVE-----
General information:
TITO was launched using:
RESULT:
Template:
2DZS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -189302 for 1998 contacts (-94.7/contact) +
2D Compatibility (PS) -26126 + (NN) -18882 + (LL) 2024
1D Compatibility (HY) -14000 + (ID) 4050
Total energy: -250336.0 ( -125.29 by residue)
QMean score : 0.663
(partial model without unconserved sides chains):
PDB file :
Tito_2DZS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DZS-query.scw
PDB file :
Tito_Scwrl_2DZS.pdb
: