Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTFLEEILAQKEVEVAKMPLEQVAEKRKTYSFYEFLKANTNTMQLIAEVKRASPSKGEINMGVNPVLQAKSYQAAGAGMISVLTDPVFFKGSIEDLREVAKNVGIPVLCKDFIISEKQLIRARNAGATVVLLIISALTEEKLITLFEQALALDLEVLVEVHDQEELAVAQKIGAQLIGVNNRNLHTFEVDIAVSERLASDFSSDACFISESGFRTAEDVARVSQ-KYDAVLVGEALMREATPEVAAKSLKVTR
1LBF Chain:A ((38-240))
---------------------------------EFNKRNITA--IIAEYKRKSPSG--LDVERDPIEYSKFMERYAVGL-SILTEEKYFNGSYETLRKIASSVSIPILMKDFIVKESQIDDAYNLGADTVLLIVKILTERELESLLEYARSYGMEPLIEINDENDLDIALRIGARFIGINSRDLETLEINKENQRKLISMIPSNVVKVAESGISERNEIEELRKLGVNAFLIGSSLMR--NPE----------
General information:
TITO was launched using:
RESULT:
Template:
1LBF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122243 for 1620 contacts (-75.5/contact) +
2D Compatibility (PS) -22449 + (NN) -11115 + (LL) 5572
1D Compatibility (HY) -19600 + (ID) 4000
Total energy: -173835.0 ( -107.31 by residue)
QMean score : 0.587
(partial model without unconserved sides chains):
PDB file :
Tito_1LBF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LBF-query.scw
PDB file :
Tito_Scwrl_1LBF.pdb
: