Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VIPAKLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGGFNSNQLLPYLDYDLISENPKILCGFSDITALATAIYTQTELITYSG-AHFSSFS-MEKGLDYVMESFSDCLLQKE--PFALKESATWSDDEWYLDQENRN----FIPNEGLVVMQPGVAEGIIIGGNLCTLNLLQGTEYMPNLA-GTILFIED---DFMTIPETFDRDLESLLSQPGA-DEIEGMVIGRFQQKTAMTAEKLAY-IIETKTALQKIPVISGADFGHTQPIATFPIGGTARID-TNQTDKIQIIRH |
| 3SR3 Chain:A ((3-327)) | -LPKSLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIGGMNSNSLLPYIDYDAFQNNPKIMIGYSDATALLLGIYAKTGIPTFYGPALVPSFGEFEPFVDDTYKYFLETLLHDQALPYNIKQPLFWSDE--FINAEEKTKEKELRPNNWISVTN-GQATGRVIGGNLNTIQGIWGSPYMPCIQEGDILFIEDSSKDAATIERSF-----SFLKINGVFDKVSGIILGKHEQFDDCGTNRKPYEILLEVLQNQRIPLLADFDCCHTHPMITMPIGVQVKMDATNKTIHI----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SR3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186068 for 2682 contacts (-69.4/contact) +
2D Compatibility (PS) -32619 + (NN) -6546 + (LL) 1212
1D Compatibility (HY) -23600 + (ID) 5800
Total energy: -253421.0 ( -94.49 by residue)
QMean score : 0.486
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