Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNHEQVLTDYLAAFIEELVQAGVKEAIISPGSRSTPLALMMAEHPILKIYVDVDERSAGFFALGLAKASKRPVVLLCTSGTAAANYFPAVAEANLSQIPLIVLTADRPHELRNVGAPQAMDQLHLYGSHVKDFTDMALPENSEEMLRYAKWHGSRAVDIAMKTPR-GPVHLNFPLREPLVPILEPSPFTAT---GKKHHHVHIYYTHEVLDDSSIQKMVTECTGKKGVFVVGPIDKKELEQPMVDLAKKLGWPILADPLSGLRSYGALDEVVIDQYDAFLKEAEIMDKLT-PEVVIRFGSMPVSKPLKNWLEQLSDIRFYVVDPGAAWKDPIKAVTDMIHCDERFLLDIMQQ-NMPDDAKDAAWLSRWTSYNKVAREIVLAEMANTTILEEGKIVAELRRLLPEKAGLFIGNSMPIRDVDTYFSQIDKKIKMLANRGANGIDGVVSSALGAS-VVFQPMFLLIGDLSFYHDMNGLLMAKKYKMNLTIVIVNNDGGGIFSFLPQANEPKYFESLFGTSTELDFRFAAAFYDADYHETQSVDELEEAIDKASYHKGLDIIEVKTNRHENKANHQALWAKIADALKALN |
2JLA Chain:A ((12-556)) | ----------WAAVILEALTRHGVRHICIAPGSRSTPLTLAAAENSAFIHHTHFDERGLGHLALGLAKVSKQPVAVIVTSGTAVANLYPALIEAGLTGEKLILLTADRPPELIDCGANQAIRQPGMFASHPTH--SISLPRPTQDI--PARWLVS-TIDHALGTLHAGGVHINCPFAEPLYGEMDDTGLSWQQRLGDWWQDDKPWLREAPRLESEKQRDWFFWRQKRGVVVAGRMSAEEGKK-VALWAQTLGWPLIGDVLSQTGQ-------PLPCADLWLGNAKATSELQQAQIVVQLGSSLTGKRLLQWQASCEPEEYWIVDDIEGRLDPAH------HRGRRLIANIADWLELHPAEKRQPWC---VEIPRLAEQAMQAVIARRDAFGEAQLAHRICDYLPEQGQLFVGNSLVVRLIDA-LSQLPAGYPVYSNRGASGIDGLLSTAAGVQRASGKPTLAIVGDLSALYDLNALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSER--ERFYLMPQNVHFEHAAAMFELKYHRPQNWQELETAFADAWRTPTTTVIEMVVNDTDGAQTLQQLLAQVS------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JLA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -225588 for 4849 contacts (-46.5/contact) +
2D Compatibility (PS) -58148 + (NN) -29883 + (LL) 3488
1D Compatibility (HY) -33200 + (ID) 8850
Total energy: -352181.0 ( -72.63 by residue)
QMean score : 0.400
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