Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEGVENKVIVLAGMIGAGKSSYT----------ELIANELGTKAFYESIKD------------NRILEMFYDDPKRWAFALQIYFLNTRFR----SIKAALTDQNN---VLDRSIYEDA-LFTQINFEEGNISEPEMDTYLDLLDNMMEELAYMPKKAPDLLIYLRGSLDTVLSRIALRGRPYEQIDDNPGL-LEYYKHLHSRYDSWFASYDKSETLVINIDEIDINKPNDADYVMQLIHEKLKR
2ZI9 Chain:A ((38-245))
---TRIKKISIEGNIAAGKSTFVNILKQLSEDWEVVPEPVARWSNVQSTQDEFEELTMSQKNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFFERSVYSDRYIFASNLYESESMNETEWTIYQDWHDWMNNQFG--QSLELDGIIYLQATPETCLHRIYLRGRNEEQ-----GIPLEYLEKLHYKHESWLL----HRTLKTNFD-----------------------
General information:
TITO was launched using:
RESULT:
Template:
2ZI9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77205 for 1226 contacts (-63.0/contact) +
2D Compatibility (PS) -19111 + (NN) -8333 + (LL) 2060
1D Compatibility (HY) -13200 + (ID) 3100
Total energy: -118889.0 ( -96.97 by residue)
QMean score : 0.377
(partial model without unconserved sides chains):
PDB file :
Tito_2ZI9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZI9-query.scw
PDB file :
Tito_Scwrl_2ZI9.pdb
: