Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ISKDMLVNDGIRAREVRLIDQDGEQLGVKSKIDALQIAEKANL-------DLVLVAP--TAKPPVARIMDYGKFRFEQQKKDKE----ARKNQKVIVMKEVRLSPTIDEHDFDTKLRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRPKMDGRSMFLVLAPLHEK |
1IYW Chain:A ((741-821)) | ------------AQEVR-VYLEGETAPVEENLEVFRFLSRADLLPERPAKALVKAMPRVTARMPLEGLLDVEEWRRRQEKRLKELLALAERSQR------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IYW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 414488 for 2145 contacts (193.2/contact) +
2D Compatibility (PS) -7014 + (NN) 1289 + (LL) 7936
1D Compatibility (HY) 1600 + (ID) 450
Total energy: 417849.0 ( 194.80 by residue)
QMean score : ?
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