Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQLKVENLTKTYGEKSLFENISLTITEGERIGLIGVNGTGKSTLLQIISGSESGDKGTVTKAKDYTIGYLAQDPAF--NEEDTVLAAVFDGDTAALRAMRKYEEV-LLAMSLDAENTKLHDAYTAASQEMDASAAWDMNTEAKTILERLGITDLTAKISALSGGQRKRVGLAQVLIETPDLLILDEPTNHLDFQSIRWLEEYLNRFKG---AVLLVTHDRYFLDRVTN--HMVELDRGSAYRYVGNYEKFMESKAIRMENEVRESEKNKNLYRKELAWMRRGPQGRATKQNAR----QDRFHDLEKKVKIKTDDSELAIDFVTSRLGKDVFELKNLEKRFDEKQVLQDFSLIIQPGERLGITGNNGTGKSTLLNMLAGKLAPDAGEVVTGQTVQIGYYTQQNEEMDPDMRMIAYLQEAGEQVTTSGGEVISVSAMLERF----LFPP----NSHGKKIGSLSGGEKRRLFLLRILMERPNVLLLDEPTNDLDT-QTLTV---LEDYLESFNGTVITVSHDRYFLDKVVNKLLVFRAIGEVEIFYGEYSDYLKELEAKGKPAKSMKKMANTSVEKSSPEKKEKVKLTYQEQLEWDGIEDAISKLEKDIESLNETLEQTGADFTKAAEISGFITAKETELEQMMERWEFLSQYAE |
| 3BK7 Chain:A ((95-545)) | ------EDCVHRYGVNAFVLYRLPIVKDGMVVGIVGPNGTGKTTAVKILAGQLIPNLCEDNDSWDNVIR------AFRGNELQNYFERLKNGE---IRPVVKPQYVDLLPKAVKGKVREL----LKKVDEVGKFEEVVKELELENVLDR--------ELHQLSGGELQRVAIAAALLRKAHFYFFDEPSSYLDIRQRLKVARVIRRLANEGKAVLVVEHDLAVLDYLSDVIHVV-------YGEPGVYGIFSKPKGTR--NGINEFL-----------------QGYLKDENVRFRPYEIRFTKLSERVDV---ERETLVEY--PRLVKDYGSFK-LEVEPGE----------IRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEWDLTVA---YKPQ------------YIKAEYEGTVYELLSKIDSSKLNSNFYKTELLKPLGIIDLYDRNVEDLSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLIVF----------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62515 for 3352 contacts (-18.7/contact) +
2D Compatibility (PS) -45045 + (NN) -12178 + (LL) 15660
1D Compatibility (HY) -30400 + (ID) 6800
Total energy: -141278.0 ( -42.15 by residue)
QMean score : 0.252
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