Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKITINQASEFVGKEVTIGAWLANKRSSGK-IAFLQLRDGTGFMQGVVVKAEVGDDIFATAKALT--QETSLYVTGTINE-DTRSPFGYEMAVSSVEVISESHDYPI---TPKEHGTEFLMDHRHLWLRSNRQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGSAPEGTTELFHTKYFEEDAFLSQSGQLYMEAAAMAFGKVFSFGPTFRAEKSKTRRHLIEFWMIEPEMAFYKLEDSLQVQENYVAFLVKAVL--DNCRLELDRLGRDVSHLEKMVAPFPRITYTEAIERLHELGFDD-----IVWGDDFGAPHETAIADSFEKPVFITHYPKAIKPFYMPEDPENDQVVLCADMIAPEGYGEIIGGSERIHDLETLQARMEDFDLDQEAYSWYLDLARYGSVPHSGFGLGLERTVAWISGTEHVRETIPFPRLLNRLYP |
| 2XTI Chain:A ((3-437)) | --VKIRDLVKHRNERVCIKGWIHRMRRQGKSLMFFILRDGTGFLQVLLM-----DKLCQTYDALTVNTECTVEIYGAIKEV--EAPNGHELIADFWKIIGNAPPGGIDNVLNEEASVDKMLDNRHLVIRGENAAALLRLRAAATRAMREHFYNAGYVEVAPPTLVQTQVEGGSTLFNLDYFGEQSFLTQSSQLYLETCIPTLGDVFCIAQSYRAEKSRTRRHLAEYAHVEAECPFITLDDLMEKIEELVCDTVDRLLADEEAKKLLEHINPKFQPPER---PFLRMEYKDAIKWLQEHNVENEFGNTFTYGEDIAEAAERFMTDTINKPILLNRFPSEIKAFYMQRDAKDNTLTESVDLLMP-GVGEIVGGSMRIWKFDELSKAFKNVEIDPKPYYWYLDQRLYGTCPHGGYGLGLERFICWLTNTNHIRDVCLYPRFVGRCVP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2XTI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -191697 for 3283 contacts (-58.4/contact) +
2D Compatibility (PS) -44600 + (NN) -14165 + (LL) 1212
1D Compatibility (HY) -36000 + (ID) 7200
Total energy: -292450.0 ( -89.08 by residue)
QMean score : 0.467
|
|
|