Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLIIRNKQELKEVILKQKQANKTIGFVPTMGFLHEGHMTLVSHARKESDFVVMSVFVNPTQFGPNEDFDAYPRDEAHDAKLAEEGGVDILFVPTVEEIYPTELSTKLHVDKRVSVLDGADREGHFDGVVTVLTKLFHLVSPDNAYFGQKDAQQVAVVSGLVEDYFFPVNLRIIATVREADGLAKSSRNVYLTEKERKEAPVIHEALQLGRKLIESGETNQAKIVQMMTEKINEQTSHELIAYLAIYSYPEFTPVTDWSKGIIIAAAVKYSKARLIDNELINVKRR |
3UY4 Chain:A ((6-281)) | --VITSVKEAKQIVKDWKSHQLSIGYVPTMGFLHDGHLSLVKHA-KTQDKVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDNGVDMVFIPDATQMYLKNFSTYVDMNTITDKLCGAKRPGHFRGVCTVLTKFFNILNPDIVYMGQKDAQQCVVVRHMVDDLNFDLKIQICPIIREEDGLAKSSRNVYLSKEERKASLAISQSIFLAEKLVREGEKNTSKIIQAMKD-ILEKEKLIKIDYIELVDFNTMENIENITDNVLGAVAAFVGKTRLIDNFLV----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UY4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152181 for 2285 contacts (-66.6/contact) +
2D Compatibility (PS) -30213 + (NN) -16283 + (LL) 924
1D Compatibility (HY) -29600 + (ID) 6100
Total energy: -233453.0 ( -102.17 by residue)
QMean score : 0.529
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