Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRVAVSGFKGRMGHEVVKTVLREADLE-LVAVLDHEPKE---KNINEMVEFSSLDVPVFGNLSEMLEEIKPDCVVDFTTPKVGYSNTKTILEHGVRAVVGTTGFTPEQISELRTIAESKKIGALIAPNFAVGAVLMMQFAQKAAKYFPN---VEIIELHHDNKLDAPSGTGVKTAEMMAET--REFVKQGAADEVELIEGARGAEYEGMRIHSVRLPGLVAHQEVIFGAEGQGLTIRHDSYDRISFMSGVALSVRKTKELETLIYGLENILD |
4YWJ Chain:A ((11-273)) | -RIAVVGAAGRMGKNLIEAVQQTGGAAGLTAAVDRPDSTLVGADAGELAGLGRIGVPLSGDLGKVCEEF--DVLIDFTHPSVTLKNIEQCRKARRAMVIGTTGFSADE--KLLLAEAAKDIPIVFAANFSVGVNLCLKLLDTAARVLGDEVDIEIIEAHHRHKVDAPSGTALRMGEVVAQALGRDL-QEVAVYGREGQTGARARETIGF--ATVRAGDVVGDHTVLFAAEGERVEITHKASSRMTFARGAVRAALWLEGKENGLYDMQDVL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YWJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140951 for 2023 contacts (-69.7/contact) +
2D Compatibility (PS) -26763 + (NN) -5559 + (LL) 728
1D Compatibility (HY) -15200 + (ID) 4100
Total energy: -191845.0 ( -94.83 by residue)
QMean score : 0.515
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