Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LLYSLLANRAFLRLLFFGNLLGAIYGYIWYLPQLQMTEPRFWLFVPDSPTAILFFTLALVAFLGKKHWPLMEALGFVCLVKYGLWAVGMNIFYMVDQGVLVWGSVVLILTHGFMAVEGILYAPFYRFRIGHFMIAAVWVFHNDVIDYVFGQMPIYMGLEKYLPEIGYATFWLTVLVLWFVYDKTIKNKHLTLEFPHDE |
| 2HFR Chain:A ((3-8)) | ----------------------------------------FWPLVP-------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HFR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1006 for 12 contacts (-83.8/contact) +
2D Compatibility (PS) -528 + (NN) 290 + (LL) 17312
1D Compatibility (HY) -1200 + (ID) 200
Total energy: 14668.0 ( 1222.33 by residue)
QMean score : -0.288
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