Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLNFLYANMQKDIDSVEKELKKALSGAAADTTSAAALHLLEAGGKRIRPMFVCLSARLAANADFNAVKNASVAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEI-KDVAAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLPVFFAM-EDPFLKKRISQITEETPAEE---IAVLVEEVKKTGAKQAE-DVATTYLKKAVEILDSLPQVPELKPLKQIVRVLDKRNY |
| 3LMD Chain:A ((34-348)) | -----LTARINDAMVQVEELLHTELS-SGEDFLVDIVMHLTRAGGKRFRPMFALLASEFGEKPLSENVIKAAVVVEITHLATLYHDDVMD-----------NARWDNSVAILAGDILLAHASGLMSQLGTDTVAH--FAETFGELVTGQMRETVGPRDTD-PIEHYTNVIREKTGVLIASAGYLGAMHAGAAPEHIDALKNFGAAVGMIFQIVDDIIDIFS--------PGTDLREGVFTLPVLYALREDTPVGAELRDIL-TGPLEDDETVNHVLELLSQSGGRQAALDEVYRYMDIANAELDRLPDSTVKEALRNLATFTVKR-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3LMD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -124983 for 2310 contacts (-54.1/contact) +
2D Compatibility (PS) -30842 + (NN) -16120 + (LL) 1744
1D Compatibility (HY) -19600 + (ID) 4900
Total energy: -194701.0 ( -84.29 by residue)
QMean score : 0.490
|
|
|