Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVEMNFKVDAFEGPLDLLLHLIGQLEVDIYDIPMA---EITDQYMEFVHTMQEMELDVASEYLVMAATLLAIKSKMLLPKQELEIDY----DTLEEEEDPRDALVEKLMEYKR-----FKEAAKELKEKE-------AERSFYFSKPPMDLAEYDDGTKVAELDVSLNDMLSAFNKMLRRKKLNKPLHTRITTQEISIDQRMDSVLEKLNLQVNHRLRFDELFEEQTKEQLVVTFLALLELMKRKLVEVEQAESFADLYVQGKGEEIS |
| 4UUD Chain:A ((134-677)) | -----------------LVDLPGMTKVPVGDQPPDIEFQIRDMLMQFVTKENCLILAVSPANSDLANSDALKVAKEVDPQGQRTIGVITKLDLMDEGTDARDVLENKLLPLRRGYIGVVNRSQKDIDGKKDITAALAAERKFFLSHP------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UUD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7192 for 586 contacts (12.3/contact) +
2D Compatibility (PS) -11013 + (NN) -1091 + (LL) 11912
1D Compatibility (HY) -4400 + (ID) 1700
Total energy: 900.0 ( 1.54 by residue)
QMean score : 0.142
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