Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LPNEVYDVTIIGGGPIGLFSAFYSGLRSMKTKIIDA----EPAVGGKVRYFFPEKIIRDIGGIP-AITGENLVANLKQQAETFHPTIVCSERVVDVTKLADGTFQLTSHNGSIHFSKTIVIATGSGTFEVN-KLEALHAEDFPFAIHYDVKNIEQFRDKVVVVSGGGNSAIDWAQTLEPIAKKVHLIYRGEDFKAHEE-SVRELKNSRVEIHIHHEISELIGTNNQLTEITVCCNQTQTTKTIETEALF--INHGVKVD-LGTMAEWGFKQADFGIVVDDEMKTTVPGIFACGDSATYPRKIRIIAAGLHEGPIAINSAKKYLEPTAADEAMISTHHESFIG |
| 4CBQ Chain:A ((3-312)) | ---NIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLT---TTTIIENFPGFPNGIDGNELMMNMRTQSEKYGTTII--TETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKRMHVPGEDKYWQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRASKTMQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHSPNSKFLGGQV----KTADDGYILTEGPKTSVDGVFACGDVCDRVYRQAIVAAG--SGCMAALSCEKWLQ------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CBQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147318 for 2560 contacts (-57.5/contact) +
2D Compatibility (PS) -31825 + (NN) -7576 + (LL) 1916
1D Compatibility (HY) -16000 + (ID) 4550
Total energy: -205353.0 ( -80.22 by residue)
QMean score : 0.441
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