Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFDWLTNSTAIIIILPVVVFILTMFFSSFKLKKSQRRIMLAADLSTIFLIIAVHFFMIVLFNRSFLLYILLFLFILGIVIVVTAAKKEGEIQFRKILRGYWRLCFFIFALLYVALYLYGIVYSLVLMF
2YEV Chain:A ((549-600))
--------------------------------------IHLPNSSFWPFYSAATLFAFFVAVAALPVPNVWMWVFLALFAYGLVRWALED--------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2YEV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50702 for 274 contacts (-185.0/contact) +
2D Compatibility (PS) -5261 + (NN) -2546 + (LL) 8880
1D Compatibility (HY) -3600 + (ID) 200
Total energy: -53429.0 ( -195.00 by residue)
QMean score : 0.351
(partial model without unconserved sides chains):
PDB file :
Tito_2YEV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2YEV-query.scw
PDB file :
Tito_Scwrl_2YEV.pdb
: