Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMEETTKIPQATAKRLPLYHRYLKYLDESGKERVSSAELSEAVKVDSATIRRDFSYFGALGKKGYGYNVSYILDFFSKTLSQDKQTNVALIGVGNLGTALLHYNFMKNNNIKIVAAFDVDPAKVGSVQQDIPIYHLNDMEEIVRENGVEVVILTVPADEAQVTVDRLIEADVKGILNFTPARISVPKQVRVHHIDLTTELQTLIYFLENYPAKTE
3IKT Chain:A ((3-203))
------KVPEAAISRLITYLRILEELEAQGVHRTSSEQLGELAQVTAFQVRKDLSYFGSYGT---GYTVPVLKRELRHILGLNRKWGLCIVGMGRLGSALADYPGF-GESFELRGFFDVDPEKVGRPVRGGVIEHVDLLPQRV-PGRIEIALLTVPREAAQKAADLLVAAGIKGILNFAPVVLEVPKEVAVENVDFLAGLTRLSFAILN------
General information:
TITO was launched using:
RESULT:
Template:
3IKT.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -134783 for 1438 contacts (-93.7/contact) +
2D Compatibility (PS) -20867 + (NN) -2627 + (LL) 1192
1D Compatibility (HY) -15600 + (ID) 3550
Total energy: -176235.0 ( -122.56 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_3IKT.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IKT-query.scw
PDB file :
Tito_Scwrl_3IKT.pdb
: