Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MILLQVQQISKFFGAEVILDNIKLEVKTGDRIALVGRNGAGKSTLLKIIAGKMSYDGGTISKPKSVEIGYLAQNTGLESSKTIWDEMLSVF--DSLRKMEADLRKMELRLGEPELYND--PEKYQALMTDYDTLQHTFKESGGYTYEAEIRSVLNGLRFYPEDYEVEIASLSGGQKTRLALAKLLLAKQDILVLDEPTNHLDIE---TLAWLETYLQNYHGSLLIVSHDRYFLDKVVNQVYEISRTKIDYYKGNYSSFVNQKQAK--LEQMWKEFDKQQKQIAKLEDFVARNIVRASTTKRAQSRRKQLEKMDVLGRPQGDEKAAHFGFQFEKQTGKDVLMVDQLSIGYAKDKRIASNLTFEMKRQDSLALVGPNGIGKSTLLKTLIRDIPALSGEFHFGAGVKIGYYDQEQAKLTSNKTVLMELWD--DYPELNEVNVRTTLGNFLFSDDDVLKNVQSLSGGEKARLALAKLTLLEANVLILDEPTNHLDIESKEVLEAALIDF----EGTILFVSHDRYFINRIASKIVELAPEKATVFLGDYDYYQEKLAEEKELARLDAEDRRKKGEQVEATASVRKLNYQEEKEQQKLLRQRKRKLEEIEKSMEETDEKIAELELQLTNPEVFQDHEKALEITQELDAVKADGEKLMEEWEQISEELESI |
| 3J15 Chain:B ((100-529)) | -------------------------VKDGMVVGIVGPNGTGKTTAVKILAGQLI--------------------PNLCEDNDSWDNVIRAFRGNELQNYFERLKNGEIRPVVKPQYVDLLP---KAVKGKVRELLKKVDEVGKFEEVVKELELENVL-------DRELHQLSGGELQRVAIAAALLRKAHFYFFDEPSSYLDIRQRLKVARVIRRLANEGKAVLVVEHDLAVLDYLSDVIHVVYGEP-----GVYGIFSKPKGTRNGINEFLQGYLKDENV-----RFRPYEIRFTKLSERVDVERETLVEYPRLVKDYGS-------FKLEVEPG-------------------------EIRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEWDLTVA---YKPQYIKAEYEGTV-YELLSKIDSSKLNSNFYKTELLKPLGIIDLYDRNVEDLSGGELQRVAIAATLLRDADIYLLDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLI-------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3J15.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69056 for 3256 contacts (-21.2/contact) +
2D Compatibility (PS) -43838 + (NN) -15367 + (LL) 20156
1D Compatibility (HY) -28000 + (ID) 6300
Total energy: -142405.0 ( -43.74 by residue)
QMean score : 0.313
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