Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIPFIIQYVKSTLGPTAIFEGRKVLKFWQMVIVFIFLNALLLLPVSAHFANQSSFDLPSLMPKMATLGTDQLASKISGLTLENGALTDKNAHI-VEKTVNGVAGVNLTKAELSGA---KNVINFKDQEMTLTDASGYNFEVSYPKDATLSEITSGESLVDWVSAQWYLENQAFVFLSMVLMIGSIIFVSSLMLTVFTTLFIWMTKRSSFSSIASFKESVNLTLNALGIPVIAACIIGFIYFDITIIMAVQSLGMVLMIAWTFLKTRFYKTSEKSMAASR |
5A1W Chain:G ((762-874)) | ----------------------------------------------------NQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPHDFANIKANVKVASTENGIIFGNIV-YDVSGAASDRNCVVLSDIHIDIMD---------YIQPAT---CTDAEFRQMWAEFEW--ENKVTVNTNM----------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 5A1W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 6193 for 579 contacts (10.7/contact) +
2D Compatibility (PS) -11064 + (NN) 6714 + (LL) 16696
1D Compatibility (HY) -5200 + (ID) 350
Total energy: 12989.0 ( 22.43 by residue)
QMean score : 0.027
|
|
|