Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTKKRGLMLLAAVLLTVCAIWEYAMPTDAAVKSYYVKVEDAGKPVQKNQFKGFKYVSNVYDDKGKQKQLTFYSEKELTKNEQFKVLVGENKMVVNYKKIKNVPDKIKYLAEK
3N0H Chain:A ((21-90))
----------------------------------------DLPWPPLRNEFRYFSRMTTTSSVEGKQNLVIMGKKTWFSIPEKFRPLKGRINLVLS-RELKEPPQGAHFLS--
General information:
TITO was launched using:
RESULT:
Template:
3N0H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 14313 for 385 contacts (37.2/contact) +
2D Compatibility (PS) -7238 + (NN) -701 + (LL) 4716
1D Compatibility (HY) -2000 + (ID) 800
Total energy: 8290.0 ( 21.53 by residue)
QMean score : 0.460
(partial model without unconserved sides chains):
PDB file :
Tito_3N0H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3N0H-query.scw
PDB file :
Tito_Scwrl_3N0H.pdb
: