Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VKIKSFLGKSLTLVVLGVFLFSGWKIGMELYENKHNQTILDDAKAVYTKDAATTNVNGEVRDELRDLQKLNKDMVGWLTIIDTEIDYPILQSKDNDYYLHHNYKNEKARAGSIFKDYRNTNEFLDKNTIIYGHNMKDGSMFADLRKYLDKDFLVAHPTFSYESGLTNYEVEIFAVYETTTDFYYIETEFPETTDFEDYLQKVKQQSVYTSNVKVSGKDRIITLSTCDTEKDYEKGRMVIQGKLVTK
1QX6 Chain:A ((25-211))
---------------------------------------------------------AHVRPQFESLEKINKDIVGWIKLSGTSLNYPVLQGKTNHDYLNLDFEREHRRKGSIFMDFRNELKNLNHNTILYGHHVGDNTMFDVLEDYLKQSFYEKHKIIEFDNKYGKYQLQVFSAYKTTTKDNYIRTDFENDQDYQQFLDETKRKSVINSDVNVTVKDRIMTLSTCEDAYSETTKRIVVVAKII--
General information:
TITO was launched using:
RESULT:
Template:
1QX6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63168 for 1449 contacts (-43.6/contact) +
2D Compatibility (PS) -19977 + (NN) -6607 + (LL) 4392
1D Compatibility (HY) -19600 + (ID) 3650
Total energy: -108610.0 ( -74.96 by residue)
QMean score : 0.536
(partial model without unconserved sides chains):
PDB file :
Tito_1QX6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1QX6-query.scw
PDB file :
Tito_Scwrl_1QX6.pdb
: