Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTEQREKLLEIHNLKQYFNKGTASEVRAVDDISFDIYKGETLGLVGESGCGKSTTGRTIIRLYDATGGEVIYNGKDVHARKSRKEMLEFRRKMQMIFQDPYASLNPRMKVKDIIAEGIRIHGLAKTPEETNKQVYDLLETVGLSKEHAGRYPHEFSGGQRQRIGIARALAVQPEFIIADEPISALDVSIQAQVVNLLRQLQKEKNLTYLFIAHDLSMVKYISDRIGVMYFGKLVELAPANDLYHAPLHPYTESLLSAIPLPDPNYERTRVRKTYDPTSHNYKDGDEIKMREIAPGHFVYCSEEEEVMYKEKHAKLTAEAAAK |
| 2YYZ Chain:A ((4-238)) | --------IRVVNLKKYFGK-----VKAVDGVSFEVKDGEFVALLGPSGCGKTTTLLMLAGIYKPTSGEIYFDDVLVNDIPPK------YREVGMVFQN-YA-LYPHMTVFENIAFPLRARRISK--DEVEKRVVEIARKL-LIDNLLDRKPTQLSGGQQQRVALARALVKQPKVLLFDEPLSNLDANLRMIMRAEIKHLQQELGITSVYVTHDQAEAMTMASRIAVFNQGKLVQYGTPDEVYDSPKNMFVASFIGNPP--------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YYZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -125989 for 1874 contacts (-67.2/contact) +
2D Compatibility (PS) -24460 + (NN) -570 + (LL) 5352
1D Compatibility (HY) -18800 + (ID) 4150
Total energy: -168617.0 ( -89.98 by residue)
QMean score : 0.440
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