Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSFILEVGSLADWVSGLATVGALFWAIKLNSNENRKRLTILFRHSFVSKKNGIIISDGKPKV--FIITPVNNSKFSLEINFRQILLVPSLMDRLLFRAEPKKLSNIEALLKQLENKANWQIIKPNLSGEPIMFDYEFIVKQIKKYADGKRFNFAIEIQFIDSTSKIFKHKEKLELRKIKGL |
3OLC Chain:X ((111-185)) | --------------------------ISCTSLEKEKREEV---HKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQEKKIT----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OLC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -1410 for 413 contacts (-3.4/contact) +
2D Compatibility (PS) -7342 + (NN) -1179 + (LL) 9288
1D Compatibility (HY) 2800 + (ID) 400
Total energy: 1757.0 ( 4.25 by residue)
QMean score : 0.124
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