Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSGIQWIKLSVNMFDDEKIKLLEKMPEGNQMLIVWIRLLALAGKTNDKGRIYLNENVPYTEDMLATLFNRDVGIIRVTLHTLQSFGMIQKTENGLIEIENWEKHQNVDGMERVREQTRKRVEKHREAMRQNRIASGDSKGNKECNVTSSVTVTQSNAIDIDKELDKDINNNNSDLNFKDFWEQNGFGMMLPVELEKLLAWVDDFAGNREIVMKALEVTSEQGAN----KRNYAYVNKILKNWESRGFKTIADV-DAAEKQRQIELEQKYNKPTYNKYNKPVKEEVLPDWFDKDQKQTKQETSTTGSSEDLEKQVAEIKAQLAARNEVQA |
1IPE Chain:A ((15-88)) | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKLN--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IPE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 13499 for 380 contacts (35.5/contact) +
2D Compatibility (PS) -7386 + (NN) -3258 + (LL) 18056
1D Compatibility (HY) -2000 + (ID) 1100
Total energy: 17811.0 ( 46.87 by residue)
QMean score : 0.489
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